I found it here;
http://gehasoku.com/archives/51387686.html
They started in 1994, but maybe they were able to obtain older data from retailers.
I had not seen that before. Thanks!
Media Create, the company, was founded in 1994, but their sales info goes back to 1992.
http://www.m-create.com/biz/data.html
In fact, all games in that list are from 92 or newer. (Another note, specific to that page: Any game between 1992 and 1997 that sold less than 10k was not included.)
Mario Kart Double Dash - 784,103
Mario Kart: Super Circuit - 709,263 (didn't this end up selling closer to 900K?)
Mario Kart 64 - 1,239,738 (also wasn't this like 1.7m)
Super Mario Kart - 3,524,172
Metroid Zero Mission - 58,546
Metroid Prime - 86,816
Metroid Fusion - 154,862
Super Metroid - 508,698
Metroid 2 (GB) - 102,550
There's an oddity with MK64 with all trackers. Famitsu has the highest number, the 1.7 million you noted, but that's still far below the 2.2 million Nintendo says they shipped.
Here's the rest:
[GBA] Yu-Gi-Oh! World Championship Tournament 2004 {2004-02-05} (Konami) - 64,559
[GBA] Yu-Gi-Oh! Reshef of Destruction {2003-03-20} (Konami) - 141,851
[NGC] Yu-Gi-Oh! The Falsebound Kingdom {2002-12-05} (Konami) - 55,601
[GBA] Yu-Gi-Oh! The Sacred Cards {2002-07-04} (Konami) - 293,807
[GBA] Yu-Gi-Oh! Duel Monsters 6 Expert 2 {2001-12-20} (Konami) - 377,034
[PS2] Yu-Gi-Oh! The Duelists of the Roses {2001-09-06} (Konami) - 104,924
[GBA] Yu-Gi-Oh! The Eternal Duelist Soul {2001-07-05} (Konami) - 411,883
[GBA] Yu-Gi-Oh! Dungeon Dice Monsters {2001-03-21} (Konami) - 155,133
[NGB] Yu-Gi-Oh! Duel Monsters: 4 Battle of Great Duelist (Yugi / Joey / Kaiba Deck) {2000-12-07} (Konami) - 2,412,952
[NGB] Yu-Gi-Oh! Dark Duel Stories {2000-07-13} (Konami) - 933,511
[NGB] Yu-Gi-Oh! Capture Monster GB {2000-04-13} (Konami) - 205,235
[PS1] Yu-Gi-Oh! Forbidden Memories {1999-12-09} (Konami) - 489,227
[NGB] Yu-Gi-Oh! Duel Monsters II: Dark Duel Stories {1999-07-08} (Konami) - 1,414,319
[NGB] Yu-Gi-Oh! Duel Monsters {1998-12-17} (Konami) - 1,535,819
[PS1] Yu-Gi-Oh! Monster Capsule Breed & Battle {1998-07-23} (Konami) - 269,258
[PS2] Monster Rancher 4 {2003-08-14} (Tecmo) - 174,458
[GBA] Monster Rancher Advance 2 {2002-10-25} (Tecmo) - 117,363
[GBA] Monster Rancher Advance {2001-12-07} (Tecmo) - 174,784
[PS2] Monster Rancher 3 {2001-03-22} (Tecmo) - 142,714
[PS1] Monster Rancher: Hop-A-Bout {2001-03-22} (Tecmo) - 10,466
[PS1] Monster Rancher: Battle Card Episode II {2000-03-23} (Tecmo) - 55,120
[NGB] Monster Rancher: Battle Card GB {1999-12-24} (Tecmo) - 155,518
[PS1] Monster Rancher 2 {1999-02-25} (Tecmo) - 588,551
[PS1] Monster Rancher {1997-07-24} (Tecmo) - 722,112
[PS2] Dynasty Warriors 4: Empires {2004-03-18} (Koei) - 325,303
[PS2] Samurai Warriors {2004-02-11} (Koei) - 1,040,475
[PS2] Dynasty Warriors 4: Xtreme Legends {2003-09-25} (Koei) - 536,424
[PS2] Dynasty Warriors 4 {2003-02-27} (Koei) - 1,153,834
[PS2] Dynasty Warriors 3: Xtreme Legends {2002-08-29} (Koei) - 723,693
[PS2] Dynasty Warriors 3 {2001-09-20} (Koei) - 957,260
[PS2] Dynasty Warriors 2 {2000-08-03} (Koei) - 363,151
[GBA] Mega Man Battle Network 4: Red Sun {2003-12-12} (Capcom) - 427,047
[GBA] Mega Man Battle Network 4: Blue Moon {2003-12-12} (Capcom) - 475,026
[GBA] Mega Man Battle Network: Battle Chip GP {2003-08-08} (Capcom) - 49,932
[GBA] Mega Man Battle Network 3: Blue {2003-03-28} (Capcom) - 157,129
[NGC] Mega Man Battle Network: Transmission {2003-03-06} (Capcom) - 79,752
[GBA] Mega Man Battle Network 3: White {2002-12-06} (Capcom) - 500,103
[GBA] Mega Man Battle Network 2 {2001-12-14} (Capcom) - 442,168
[GBA] Mega Man Battle Network {2001-03-21} (Capcom) - 224,382